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Watch the video at http://www.hhmi.org/biointeractive/drosophila-molecular-clock

ID: 60770 • Letter: W

Question

Watch the video at http://www.hhmi.org/biointeractive/drosophila-molecular-clock-model
The video presents several of the molecular participants in the biological clock mechanisms of fruit flies.

Summarize the circadian (at dawn, noon, sunset, and midnight) changes (increasing, decreasing or steady) in ONE of the following sets:

1) per mRNA, PER protein, tim mRNA, TIM protein, PER-TIM heterodimer

2) cyc mRNA, CYCLE protein, clk mRNA, CLOCK protein, CLK-CYC heterodimer

including CRYPTOCHROME and DOUBLETIME KINASE in your answer.

Explanation / Answer

1)-

In absence of light, PER & TIM are both formed from the respective mRNAs. In presence of increased concentration of PER & TIM, PER-TIM heterodimers are formed. These heterodimers accumulate & around midnight, when enough have been formed, they enter the nucleus & inactivate the transcription factors CYC-CLK; & hence prevent transcription of per & tim mRNAS & therefore the respective proteins.

At dawn, in presence of light, CRY is activated & it inactivates TIM protein- as a result, PER-TIM heterodimer is destroyed & then PER is being inactivated by DOUBLE-TIME KINASE. This allows CYC-CLK to again bind to promoters of per & tim genes & start transcription & eventually translation.

ELEMENTS controlling circadian rhythm

DAWN

NOON

SUNSET

MIDNIGHT

per mRNA

Begins increasing

increasing

steady

decreasing

PER protein

steady

decreasing

increasing

steady

tim mRNA

Begins increasing

increasing

steady

decreasing

TIM protein

Begins decreasing due to activation of CRY protein

decreasing

increasing

steady

PER-TIM heterodimer

Begins decreasing

decreasing

increasing

steady

ELEMENTS controlling circadian rhythm

DAWN

NOON

SUNSET

MIDNIGHT

per mRNA

Begins increasing

increasing

steady

decreasing

PER protein

steady

decreasing

increasing

steady

tim mRNA

Begins increasing

increasing

steady

decreasing

TIM protein

Begins decreasing due to activation of CRY protein

decreasing

increasing

steady

PER-TIM heterodimer

Begins decreasing

decreasing

increasing

steady