Use the Fisher LSD method to determine which means are different. In the Fisher
ID: 3172322 • Letter: U
Question
Use the Fisher LSD method to determine which means are different. In the Fisher LSD Caclulation, what is N-a (the 2nd DOF for t)??
An article in the Journal of Agricultural Engineering Research (1992, Vol. 52, pp. 53-76) described an experiment to investigate the effect of drying temperature of wheat grain on baking quality bread. Three temperature levels were used, and the response variable measured was the volume of the loaf of bread produced. The data are as follows: Temperature (oco Volume (CC) 70.0 1245 1235 1285 1245 1235 1235 1240 1200 1220 1210 75.0 80.0 1225 1200 1170 1155 1095Explanation / Answer
Using R
mix_tech <- rep(c(70,75,80),each=5)
mix_tech <- factor(mix_tech)
ten_str <- c(1245,1235,1285,1245,1235,1235,1240,1200,1220,1210,1225,1200,1170,1155,1095)
model <- lm(ten_str~mix_tech)
ANOVA <- anova(model)
ANOVA
# Fisher Least Significant Difference (LSD) method (to compare pairwise Means)
data <- matrix(ten_str,nrow=3,byrow = TRUE)
data <- as.data.frame(data)
Mean_data <- apply(data, 1, mean)
N <- length(ten_str) # Total number of Observations
a <- length(unique(mix_tech)) # Level of temperature
n <- dim(data)[2] # Number of observations in each level (temperature)
alpha <- 0.05
error_df <- ANOVA$Df[2] # error DF (N-a+1)
mix_tech_df <- ANOVA$Df[1] # Treatment DF (a-1)
abs_diff <- c()
for(i in 1:(a-1))
{
for(j in (i+1):a){
if(i>1)
abs_diff[i+(j-1)] <- abs(Mean_data[i]-Mean_data[j])
else
abs_diff[i+(j-2)] <- abs(Mean_data[i]-Mean_data[j])
}
}
abs_diff
MSE <- ANOVA$`Mean Sq`[2]
t <- qt(1-alpha/2,N-a)
t
LSD <- t*sqrt(2*MSE/n)
LSD
# If Absolute Difference > Fisher LSD then Reject H0 (corrousponding means Differs Significantly)
# N-a is (N is total observation)- (a is number of row)
#hypothesis, H0:u1=u2=u3 vs H1:u1=!u2=!u3 (u is mean of corresponding level of temperature)
USING minitab:-
MTB > OneWay;
SUBC> Response 'volume';
SUBC> Categorical 'temperature';
SUBC> IType 0;
SUBC> Fisher 5;
SUBC> GMCI;
SUBC> TANOVA;
SUBC> Nodefault.
One-way ANOVA: volume versus temperature
Method
Null hypothesis All means are equal
Alternative hypothesis At least one mean is different
Significance level = 0.05
Analysis of Variance
Source DF Adj SS Adj MS F-Value P-Value
temperature 2 16480 8240 7.84 0.007
Error 12 12610 1051
Total 14 29090
Fisher Pairwise Comparisons
Grouping Information Using the Fisher LSD Method and 95% Confidence
temperature N Mean Grouping
70 5 1249.00 A
75 5 1221.00 A
80 5 1169.0 B
Means that do not share a letter are significantly different.
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