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In labeled eppendorf tubes, prepare the dilutions indicated in the table below (

ID: 190883 • Letter: I

Question

In labeled eppendorf tubes, prepare the dilutions indicated in the table below (use calculations from pre-lab protocol). Prepare 100 ul of the most concentrated dilution (using non-boiled samples), and then prepare 50 ul of the other dilutions from that most concentrated dilution (dilute in Tris-PMSF buffer). Keep these samples on ice 5. Dilution Volume of sample (indicate if sample was re-diluted) (ul 50 Volume Tris-PMSF (ul) Total volume (ul) 100 50 50 50 Crude homogenate 1:2 Crude homogenate 1:5 Crude homogenate 1:10 Crude homogenate 1:20 AMS resuspended 1:2 AMS resuspended 1:5 AMS resuspended 1:10 AMS resuspended 1:20 AMS desalted 1:2 AMS desalted 1:5 AMS desalted 1:10 AMS desalted 1:20 NADH undiluted NADH 1:2 NADH 1:4 5 (1:2 dil)

Explanation / Answer

Dilution

Volume of Sample (indicate if the sample was prediluted) (ul)

Volume Tris-PMSF (ul)

Total volume (ul)

Crude homogenate (1:2)

50

50

100

Crude homogenate (1:5)

20 (1:2 dil)

30

50

Crude homogenate (1:10)

10 (1:2 dil)

40

50

Crude homogenate (1:20)

5 (1:2 dil)

45

50

AMS resuspended (1:2)

50

50

100

AMS resuspended (1:5)

20 (1:2 dil)

30

50

AMS resuspended (1:10)

10 (1:2 dil)

40

50

AMS resuspended (1:20)

5 (1:2 dil)

45

50

AMS desalted (1:2)

50

50

100

AMS desalted (1:5)

20 (1:2 dil)

30

50

AMS desalted (1:10)

10 (1:2 dil)

40

50

AMS desalted (1:20)

5 (1:2 dil)

45

50

NADH undiluted

100

0

100

NADH (!:2)

25 (undiluted)

25

50

NADH(1:4)

12.5 (undiluted)

37.5

50

Dilution factor= Final Volume/Initial volume

For 1: 2 Dilution,

Dilution factor=50/Initial volume

Initial volume=50/dilution factor= 50/2= 25ul

When using prediluted samples for dilution:

a) !: 5 dilution from 1: 2 dilution, the dilution becomes 1:2.5

Hence, add 10 ul for total volume of 25 ul. This becomes 20 ul for total volume of 50 ul.

20 ul of 1: 2 diluted sample + 30 ul of Tris-PMSF.

b) !: 10 dilution from 1: 2 dilution, the dilution becomes 1:5

Hence, add 5 ul for total volume of 25 ul. This becomes 10 ul for total volume of 50 ul.

10 ul of 1: 2 diluted sample + 40 ul of Tris-PMSF.

c) !: 20 dilution from 1: 2 dilution, the dilution becomes 1:10

Hence, add 2.5 ul for total volume of 25 ul. This becomes 5 ul for total volume of 50 ul.

5 ul of 1: 2 diluted sample + 45 ul of Tris-PMSF.

Query: What is * in NADH undiluted. If * is the most concentrated solution, then use the above calculation with undiluted sample. If not, use 1:2 dilution as most concentrated solution to calculate 1:4 dilution. In that case, it will be 25ul of 1:2 dilution +25ul of Tris-PMSF= 50ul total volume.

Dilution

Volume of Sample (indicate if the sample was prediluted) (ul)

Volume Tris-PMSF (ul)

Total volume (ul)

Crude homogenate (1:2)

50

50

100

Crude homogenate (1:5)

20 (1:2 dil)

30

50

Crude homogenate (1:10)

10 (1:2 dil)

40

50

Crude homogenate (1:20)

5 (1:2 dil)

45

50

AMS resuspended (1:2)

50

50

100

AMS resuspended (1:5)

20 (1:2 dil)

30

50

AMS resuspended (1:10)

10 (1:2 dil)

40

50

AMS resuspended (1:20)

5 (1:2 dil)

45

50

AMS desalted (1:2)

50

50

100

AMS desalted (1:5)

20 (1:2 dil)

30

50

AMS desalted (1:10)

10 (1:2 dil)

40

50

AMS desalted (1:20)

5 (1:2 dil)

45

50

NADH undiluted

100

0

100

NADH (!:2)

25 (undiluted)

25

50

NADH(1:4)

12.5 (undiluted)

37.5

50

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